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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945585.1_cds_XP_016488036.1_78711
CDS Infomation

[gene=LOC107808067] [db_xref=GeneID:107808067] [protein=alpha-mannosidase-like] [exception=annotated by transcript or proteomic data] [protein_id=XP_016488036.1] [location=join(56337..56555,56632..56715,56989..57077,57159..57333,57648..57767,57850..57933,58024..58095,58209..58322,58806..58906,58990..59083,59694..59861,59973..60059,60209..60274,60362..60418,61145..61364,61507..61640,61742..61801,61891..61950,62163..>62186)] [gbkey=CDS]
Sequence

ATGGGAACTTTTGTTGCTCCAGCTTCAGTTCTGCTGTTCATTTTCTATATTATTTGTGCT
TTTGGAAGCATTGGTGTAAATGGGTACGTAAAGTACAATACTGGGGATGGAATTGTAGAA
GGTAAATTGAATGTTCATTTGGTTCCTCATTCACACGATGATGTTGGCTGGTTAAAGACT
ATTGATCAGTACTATGTTGGCTCAAATAATACCATTCAGGGTGCCTGTGTTGAAAATGTG
CTGGACTCTGTTGTTATGTCATTACGACGTGACCTGAATAGGAAGTTTGTCTTTGCTGAA
ATGGCATTTTTCCATCAGTGGTGGATACGGCAAAGCCCAGAAGTTCAAGAAGAAGTGAGA
AACCTTGTAGCTTCTGGTCAGCTGGAATTCATAAATGGTGGTTGGTGTATGCACGATGAA
GCAACTTGCCATTACATAGATATGATTGACCAGACAACACTTGGTCATCAACTGATAAAG
AATGAATTCAATATCACTCCTCGTGCAGGATGGCAGATCGATCCATTTGGCCACTCTGCT
GTTCAAGCTTACCTTCTTGGGGCTGAGGTAGGATTTGATTCTGTTCATTTTGCGCGTATT
GATTATCAAGACAGAGCAAAACGTAAGGAGGATAAATCTCTTGAGGTTATATGGCGTGCT
TCTAAAACATTTGGTTCTTCCTCCCAGATATTTACCAATGCATTTCCTGTACATTATAGT
CCACCGAATGGTTTCCATTTTGAAGTGGATGATGATTTTGTTCCAGTCCAGGATGATCCT
TTCATCTTTGATTTCAATGTTGACGTACGCGTTAATGACTTTATCAATGCCGCAATCACT
CAAGCAAATGTGACACGTACTAATCACATCATGTGGACCATGGGAGATGATTTCCAGTAC
CAATATGCTGAGTCTTGGTTCAAGGAAATGGATAAATTAATTCACTACGTAAACAAGGAT
GGTCGAGTTAATGCATTGTACTCTACTCCATCAATTTATGTAGATGCAAAACATGCCACC
AATCAATCCTTGCCTCTAAAAACTGATGATTATTTTCCATATGCAGATGGTGCAAATTCT
TATTGGACTGGTTTTTTTGCCAGTCGACCAGCTTTTAAGCGATATGTTCGTATGCTAAGT
GGATATTATCTGGCTGCTCGTCAACTTGAATTCTTAACTGGGAGGAAATCAAAGGGCTTC
AACACTTTTAGCTTAGGAGATGCTCTGGGAGTTACACAGCACCATGATGCTGTGACTGGT
ACTGCAAAACAGCATACAACTAATGATTATGCAAAACGCTTGGCTATTGGAGCTTCTGAG
TCAGAAGCAGTGGTGAATTCTGCTCTGTCATGCCTGGTTAATGCCACATCAAGTCCATGT
TCTACCACTTCATCATCATTCAACCAGTGTCAACTGCTCAATATAAGTTATTGTCCACCA
ACTGAAAAAGATATCACTGAGGGGAAGAATTTGGTTATTGTGGCATACAATCCTCTTGGA
TGGAATCGAACTGATATCGTCAAGATCCCGGTCAATGATGCTAATCTTATTGTACAAGAT
TCCGCTGGAAATCTGGTTGAGGCACAATTTGTAGAGTTGGATAATATTACCAGCAACTTG
AGAAAGTTCTATGTTGAGGCGTATCTAGGAATATCACCCAAACAAGCTGCCAAATATTGG
CTCATCTTTCGAGTGTCTGTGCCGTCTCTTGGCTGGAACACTTACTTTGTTTCTAAAGCA
TCGCAGGAGGGGAGCTCCACTGGCTATGTCTCAAAGATGGAGATTCCACTGAAAGAAACT
GTTGAAATTGGACCAGGGAACTTAAAGGCGTCCTTTTCCTCAAATTCTGGACAACTTAAA
CGTCTATATAATTCTAAAACAGGGGTTGATATACCTGTACAACAAAGCTATCTTTGGTAC
GGCTCAAGTCAGAAATCAGATCAGAATTCTGGTGCCTACATTTTCAGACCTGATGGGTCA
CCCCCAGTTATAGTTGCAAGATCTGTTCCAATAAAGGTTATTCGTGGA

Peptide Sequence

PEP ID

XP_016488036.1
PEP Infomation

PREDICTED: alpha-mannosidase-like, partial [Nicotiana tabacum]
Sequence

MGTFVAPASVLLFIFYIICAFGSIGVNGYVKYNTGDGIVEGKLNVHLVPHSHDDVGWLKT
IDQYYVGSNNTIQGACVENVLDSVVMSLRRDLNRKFVFAEMAFFHQWWIRQSPEVQEEVR
NLVASGQLEFINGGWCMHDEATCHYIDMIDQTTLGHQLIKNEFNITPRAGWQIDPFGHSA
VQAYLLGAEVGFDSVHFARIDYQDRAKRKEDKSLEVIWRASKTFGSSSQIFTNAFPVHYS
PPNGFHFEVDDDFVPVQDDPFIFDFNVDVRVNDFINAAITQANVTRTNHIMWTMGDDFQY
QYAESWFKEMDKLIHYVNKDGRVNALYSTPSIYVDAKHATNQSLPLKTDDYFPYADGANS
YWTGFFASRPAFKRYVRMLSGYYLAARQLEFLTGRKSKGFNTFSLGDALGVTQHHDAVTG
TAKQHTTNDYAKRLAIGASESEAVVNSALSCLVNATSSPCSTTSSSFNQCQLLNISYCPP
TEKDITEGKNLVIVAYNPLGWNRTDIVKIPVNDANLIVQDSAGNLVEAQFVELDNITSNL
RKFYVEAYLGISPKQAAKYWLIFRVSVPSLGWNTYFVSKASQEGSSTGYVSKMEIPLKET
VEIGPGNLKASFSSNSGQLKRLYNSKTGVDIPVQQSYLWYGSSQKSDQNSGAYIFRPDGS
PPVIVARSVPIKVIRGPLVDEIHQQF

Transcript Sequence

Gene sequence data has not been registered.